SRX091677
GSM774296: FLDN2b GATA3 sample1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Gata3

Cell type

Cell type Class
Blood
Cell type
CD4 CD8 double negative cells
NA
NA

Attributes by original data submitter

Sample

source_name
FLDN2b
strain
C57BL/6
genetic background
wildtype
cell type
Fetal liver precursor derived DN2b
chip antibody
GATA3 (Santa cruz sc-268)

Sequenced DNA Library

library_name
GSM774296: FLDN2b_GATA3_sample1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
48363330
Reads aligned (%)
51.2
Duplicates removed (%)
10.5
Number of peaks
3009 (qval < 1E-05)

mm9

Number of total reads
48363330
Reads aligned (%)
51.1
Duplicates removed (%)
10.6
Number of peaks
3070 (qval < 1E-05)

Base call quality data from DBCLS SRA